Publications and Dissemination

All forms of dissemination have to include the following acknowledgment and EU-emblem: “This project has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No 722068.” All dissemination of results reflects only the author’s view and the Agency is not responsible for any use that may be made of the information it contains.

Journal articles

  • N. Satpute, R. Naseem, E. Pelanis, J. Gómez-Luna, F. Alaya Cheikh b, O. J. Elle, J. Olivares, “GPU acceleration of liver enhancement for tumor segmentation”,  Computer Methods and Programs in Biomedicine 184 (2020) 105285, (PDF)
  • O. Zachariadis, N. Satpute, J. Gómez-Luna, and J. Olivares, “Accelerating sparse matrix–matrix multiplication with GPU Tensor Cores,” Computers & Electrical Engineering, vol. 88, p. 106848, Dec. 2020.  DOI: 10.1016/j.compeleceng.2020.106848. PDF
  • Nitin  Satpute, Juan Gomez-Luna, and Joaquín Olivares. “Accelerating Chan-Vese Model with Cross-Modality Guided Contrast Enhancement for Liver Segmentation”. Computers in Biology and Medicine (2020), PDF
  • Nikolaev, Sergei, and Stéphane Cotin. “Estimation of boundary conditions for patient-specific liver simulation during augmented surgery.” International Journal of Computer Assisted Radiology and Surgery (2020) DOI: 10.1007/s11548-020-02188-x  PDF
  • Eigl B, Haslebacher C, Muller PC, Andreou A, Gloor B, Peterhans M. “A Multimodal Pancreas Phantom for Computer-Assisted Surgery Training.” IEEE open journal of engineering in medicine and biology (2020). DOI: 10.1109/OJEMB.2020.2999786  PDF
  • Müller PC, Haslebacher C, Steinemann DC, Müller-Stich BP, Hackert T, Peterhans M, Eigl B. “Image-guided minimally invasive endopancreatic surgery using a computer-assisted navigation system.” Surgical endoscopy (2020): 1-8. DOI: 10.1007/s00464-020-07540-5
  • Satpute, N., Naseem, R., Palomar, R., Zachariadis, O., Gómez-Luna, J., Cheikh, F. A., & Olivares, J. (2020). “Fast parallel vessel segmentation”. Computer Methods and Programs in Biomedicine, 105430. DOI: 10.1016/j.cmpb.2020.105430, PDF
  • O. Zachariadis, A. Teatini, N. Satpute, J. Gómez-Luna, O. Mutlu, O. J. Elle, J. Olivares, “Accelerating B-spline interpolation on GPUs: Application to medical image registration,” Computer Methods and Programs in Biomedicine, vol. 193, p. 105431, Sep. 2020, DOI: 10.1016/j.cmpb.2020.105431 PDF
  • Paolucci, I., Sandu, R.M., Sahli, L., Prevost, G.A., Storni, F., Candinas, D., Weber, S. and Lachenmayer, A., 2019. “Ultrasound based planning and navigation for non anatomical liver resections—an ex-vivo study.” IEEE Open Journal of Engineering in Medicine and Biology. DOI: 10.1109/OJEMB.2019.2961094
  • Teatini, A., Pelanis, E., Aghayan, D.L., Kumar, R.P., Palomar, R., Fretland, Å.A., Edwin, B. and Elle, O.J., 2019. The effect of intraoperative imaging on surgical navigation for laparoscopic liver resection surgery. Scientific Reports9(1), pp.1-11. DOI: 10.1038/s41598-019-54915-3
  • Gholinejad, M., J. Loeve, A., & Dankelman, J. (2019). Surgical process modelling strategies: which method to choose for determining workflow?. Minimally Invasive Therapy & Allied Technologies28(2), 91-104. DOI: 10.1080/13645706.2019.1591457
  • Egidijus Pelanis, Rahul P. Kumar, Davit L. Aghayan, Rafael Palomar, Åsmund A. Fretland, Henrik Brun, Ole Jakob Elle & Bjørn Edwin (2019) Use of mixed reality for improved spatial understanding of liver anatomy,Minimally Invasive Therapy & Allied Technologies, DOI: 10.1080/13645706.2019.1616558
  • Pérez de Frutos, J., Hofstad, E. F., Solberg, O. V., Tangen, G. A., Lindseth, F., Langø, T., Elle, O. J., & Mårvik, R.“Laboratory test of Single Landmark registration method for ultrasound-based navigation in laparoscopy using an open-source platform.” Computed Assisted Radiology and Surgery (CARS) 2018 Conference/International Journal of Computed Assisted Radiology and Surgery. Springer 2018. DOI: 10.1007/s11548-018-1830-7

Books and Book Chapters

  • Paolucci, I., Sandu, R.M., Tinguely, P.M.P., Kim-Fuchs, C., Maurer, M., Candinas, D., Weber, S. and Lachenmayer, A., 2019. “Stereotactic Image-Guidance for Ablation of Malignant Liver Tumors” in Liver Cancer, IntechOpen DOI: 10.5772/intechopen.89722
  • Holzgang M, Eigl B, Erdem S, Gloor B, Worni M. Irreversible Electroporation in Pancreatic Cancer. IntechOpen. 2018; Available from: http://dx.doi.org/10.5772/intechopen.75737

Conference Papers/Workshops

  • Khan, Z.A., Beghdadi, A., Cheikh, F.A., Kaaniche, M., Pelanis, E., Palomar, R., Fretland, Å.A., Edwin, B. and Elle, O.J., 2020, March. Towards a video quality assessment based framework for enhancement of laparoscopic videos. In Medical Imaging 2020: Image Perception, Observer Performance, and Technology Assessment (Vol. 11316, p. 113160P). International Society for Optics and Photonics. DOI: 10.1117/12.2549266 PDF
  • Raluca-Maria Sandu; Paolucci, Iwan; Tinguely, Pascale; Freedman, Jacob; Weber, Stefan. “Quantitative Volumetric Assessment of CT-guided Ablation Treatments for Colorectal Liver Metastases” (poster presentation; 250 words abstract) in IEEE Engineering in Medicine and Biology Society (EMBS) International Student Conference (ISC) 2019, Magdeburg, Germany, November 2019 
  • Naseem, R., Cheikh, F.A., Beghdadi, A., Elle, O.J. and Lindseth, F., 2019, October. “Cross Modality Guided Liver Image Enhancement of CT Using MRI”. In 2019 8th European Workshop on Visual Information Processing (EUVIP) (pp. 46-51). IEEE.
  • Raluca-Maria Sandu “Quantitative ablation – MAVERRIC Study” (Conference Talk) at ECALSS (European Computer Assisted Liver Surgery Society) Bern, Switzerland, October 2019
  • Raluca-Maria Sandu, Iwan Paolucci, Trinidad Castillo, Pascale Tinguely, “Quantitative volumetric assessment of percutaneous image-guided microwave ablations for colorectal liver metastases – a case study”  (250 words abstract) Stefan Freedman in SMIT, International Society for Medical Innovation and Technology, Heillbronn, Germany, October 2019
  • Sandu, R.M., Paolucci, I., Tinguely, P.M.P., Candinas, D., Freedman, J. and Weber, S., 2019. “Quantitative volumetric assessment of percutaneous image-guided microwave ablations for colorectal liver metastases” CURAC (Computer- and Robot-Assisted Surgery) Conference Reutligen, Germany, September 2019
  • Hrabuska, R., Sandu, R.M., Paolucci, I. and Weber, S. “A Framework For The Quantitative Assessment of Image-guided Percutaneous Ablation of Hepatic Lesions” CURAC (Computer- and Robot-Assisted Surgery) Conference Leipzig Germany, September 2018.
  • Pelanis, E., Kumar, R. P., Fretland, A. A., Palomar, R., Elle, O. J., Edwin, B. “Use of HoloLens during laparoscopic liver resections” EAES 2018 (Abstract/Poster) https://eaes.eu/eaes2018/
  • Pelanis, E., Kumar, R. P., Fretland, A. A., Palomar, R., Elle, O. J., Edwin, B. “An Early Assessment for the use of HoloLens during Laparoscopic Liver Resections” IHPBA 2018 (Abstract/Presentation) https://www.ihpba2018.com/
  • Khan, Z. A., Kaaniche, M., Beghdadi, A. & Cheikh, F. A. “Joint Statistical Models for No-Reference Stereoscopic Image Quality Assessment”. EUVIP2018.  https://ieeexplore.ieee.org/abstract/document/8611676
  • Sergei Nikolaev, Igor Peterlik, Stéfane Cottin. “Stochastic correction of boundary conditions during liver surgery”. CVCS 2018 – 9th Colour and Visual Computing Symposium 2018 https://ieeexplore.ieee.org/abstract/document/8496720
  • Teatini, A., Pérez de Frutos, J., Langø, T., Edwin, B., & Elle, O. J. “Assessment and Comparison of Target Registration Accuracy in Surgical Instrument Tracking Technologies”. IEEE EMBC 2018. https://ieeexplore.ieee.org/document/7979650/
  • Teatini A., Wang C., Palomar R., Alaya Cheikh F., Beghdadi A., Edwin B., Elle O. J., “Validation of stereo vision based liver surface reconstruction for image guided surgery. ” CVCS 2018 – 9th Colour and Visual Computing Symposium 2018 https://ieeexplore.ieee.org/abstract/document/8496589
  • Eigl, B. P., Peterhans, M., Weber, S., Candinas, B., Gloor, B., & Worni, M. “3D planning of irreversible electroporation treatment in pancreatic carcinoma: a use case.” IHPBA 2018 (Abstract). https://www.ihpba2018.com/
  • Eigl, B. P.“First experience with computer-assisted laparoscopic needle guidance for pancreatic tumour ablation in a pig.” CURAC 2018. https://www.curac.org/en/
  • Eigl, B. P.“Stereotactic image-guidance for percutaneous transgastric irreversible electroporation of pancreatic tumors – an animal case.”CURAC 2018 (Extended Abstract). https://www.curac.org/en/
  • Teatini A., Edwin B., Elle O. J. “Assessment of target registration error for hybrid instrument tracking for image guided surgery applications.” SMIT 2017 (Abstract/Presentation) http://smit2017.com/
  • Eigl, B. P., Peterhans, M., Weber, S., Gloor, B., & Worni, M.  “Evaluation of a 3D planning tool for irreversible electroporation treatment in pancreatic cancer.” SMIT 2017 (Abstract).   http://smit2017.com/
  • Pelanis, E., Oram, L., Kumar, R. P., Elle, O. J., Edwin, B. “Magnetic resonance imaging compatible liver phantom with 3D printed vessels for pre-clinical assessment.” SMIT 2017 (Abstract/Presentation) http://smit2017.com/

Datasets

  • Jakob Elle, Ole; Teatini, Andrea; Zachariadis, Orestis (2020), “Data for: Accelerating B-spline Interpolation on GPUs: Application to Medical Image Registration”, Mendeley Data, v1 http://dx.doi.org/10.17632/kj3xcd776k.1
  • Khan, Z.A., Beghdadi, A., Cheikh, F.A., Kaaniche, M., Pelanis, E., Palomar, R., Fretland, Å.A., Edwin, B. and Elle, O.J. (2020), “Laparoscopic Video Quality Dataset”.  Dataset Access

Training

Details of HiPeNav Training events and schools can already be found on the separate ‘Training’ tab on the website.

Summer Schools

Other Events

  • “Årlig forskningsseminar for Akuttklinikken 2018″ organized by Division of Critical Care, Oslo University hospital. Speaker: Pelanis, E.
  • “The 6thCongress for Section of Young Surgeons of the Hungarian Surgical Association (FISESZ)2018” organized by Section of Young Surgeons of the Hungarian Surgical Association (FISESZ) Speaker: Pelanis, E.http://www.fisesz.hu 
  • “25 years anniversary for the Norwegian Society for Thoraco-Laparoscopic Surgery2018” organized by The Norwegian Society for Thoraco-Laparoscopic Surgery. Speaker: Pelanis, E.
  •  “Laboratory test of Single Landmark registration method for ultrasound-based navigation in laparoscopy using an open-source platform (announced as: Open-source platform for ultrasound-based navigation in laparoscopy: Laboratory test of Single Landmark registration method)” organized by International Society for Computer Aided Surgery (ISCAS) Conference, within CARS (Berlin) 2018. Speaker: Pérez de Frutos, J. https://www.cars-int.org/cars_2018/scientific_program/iscas/navigation.html?L=0%2529
  • “Høstmøtet 2017” organized by Norwegian Surgical Association. Participant: Pelanis, E. https://www.hostmotet.no

Organization of Scientific Events

Conferences & workshop

Dissemination